BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026A08SP1|AL428482
(864 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1430 1689 0.0
>3x_Contig1430
Length = 7411
Score = 1689 bits (850), Expect = 0.0
Identities = 859/864 (99%)
Strand = Plus / Minus
Query: 1 gatctcaggctcactaggaattgtcgataacgtgacagtgttggtctcagctgcatccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5183 gatctcaggctcactaggaattgtcgataacgtgacagtgttggtctcagctgcatccaa 5124
Query: 61 atgcaaagatccaataaacctatccaccttgaacagtaggttttgaaatatatcatctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5123 atgcaaagatccaataaacctatccaccttgaacagtaggttttgaaatatatcatctgg 5064
Query: 121 taaatccatttcgttgacgtccagcgccgtatcatttacgccaagtatctcactgtcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5063 taaatccatttcgttgacgtccagcgccgtatcatttacgccaagtatctcactgtcatt 5004
Query: 181 ttcatcgacaattgtatttggrtcctcaatctgaccctcatcggcggtcttattttcagt 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5003 ttcatcgacaattgtatttggatcctcaatctgaccctcatcggcggtcttattttcagt 4944
Query: 241 ttgttggcccattaccgaactctctttgagtttctgctgccagaacgcattgagttctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4943 ttgttggcccattaccgaactctctttgagtttctgctgccagaacgcattgagttctcc 4884
Query: 301 atataacatctctgtcgcatggttcaacgatgactggtccaattgacccggttgtacccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4883 atataacatctctgtcgcatggttcaacgatgactggtccaattgacccggttgtacccc 4824
Query: 361 tttcctatgaataccgcctatattttcagaggcgagacaccctgcttgatcttcatatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4823 tttcctatgaataccgcctatattttcagaggcgagacaccctgcttgatcttcatatat 4764
Query: 421 atcggatgtattggggtcgattattgaatttctgctcggccacgcggtccaatcttcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4763 atcggatgtattggggtcgattattgaatttctgctcggccacgcggtccaatcttcttt 4704
Query: 481 caagacggtcttcacaaacgtctcggtacgtaatatgttcttctcatccttattcgctct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4703 caagacggtcttcacaaacgtctcggtacgtaatatgttcttctcatccttattcgctct 4644
Query: 541 atacaatragtgtttcaatagatgcgcagagtataaatgtactgaaagatcattcctttg 600
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4643 atacaataagtgtttcaatagatgcgcagagtataaatgtactgaaagatcattcctttg 4584
Query: 601 ttcttgatctagcgttgctaacagatctatggcatcacgggccagttgtgagtccatttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4583 ttcttgatctagcgttgctaacagatctatggcatcacgggccagttgtgagtccatttt 4524
Query: 661 accgaaacaaaaccgaataaaaagggaccggtacaatgttagctacccacttgaagtcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4523 accgaaacaaaaccgaataaaaagggaccggtacaatgttagctacccacttgaagtcca 4464
Query: 721 gcggctacaattgctatgaactcaatcattagtagctgtttggattcatgttagttgatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4463 gcggctacaattgctatgaactcaatcattagtagctgtttggattcatgttagttgatc 4404
Query: 781 ctctttagttctctatccctactaaacctttaaattcaattgagaatttttgatgagctt 840
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4403 ctctttagttctctatccctactaaacctttaaattcaattgaaaatttttgatgagctt 4344
Query: 841 taaacagtgggtdagaacgaccac 864
|||||||||| | |||||||||||
Sbjct: 4343 taaacagtggataagaacgaccac 4320
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5594
Number of Sequences: 1807
Number of extensions: 5594
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 864
length of database: 10,358,551
effective HSP length: 16
effective length of query: 848
effective length of database: 10,329,639
effective search space: 8759533872
effective search space used: 8759533872
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)